RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g30790.2 View Network Show in Genome Browser |
| Other Names | Os10g0444700 |
| Description | inorganic phosphate transporter, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 16035403-16038231 Nucleotide Length: 1626 |
| Protein-coding | LOC_Os10g30790 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g50660 LOC_Os05g48422 LOC_Os05g49230 LOC_Os01g43020 LOC_Os02g38020 LOC_Os05g01310 LOC_Os06g09570 LOC_Os08g09350 LOC_Os07g01920 LOC_Os10g26660 LOC_Os09g31130 More.. |
| Downstream Genes | LOC_Os12g36950 LOC_Os12g37840 LOC_Os11g14220 LOC_Os10g42430 LOC_Os11g05730 LOC_Os12g35030 LOC_Os12g25200 LOC_Os11g19250 LOC_Os10g41190 |
| Reference | |
|---|---|
| PubMed | 21715673 12271140 21502185 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g30790.2 |
| Rice Genome Annotation | LOC_Os10g30790.2 |
| Ricechip | LOC_Os10g30790.2 |
| KEGG | osa:4348741 dosa:Os10t0444700-01 |
| Entrez-Gene | 4348741 |