RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g31490.1 View Network Show in Genome Browser |
| Other Names | |
| Description | retrotransposon protein, putative, unclassified, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 16497720-16498478 Nucleotide Length: 558 |
| Protein-coding | LOC_Os10g31490 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g05860 LOC_Os02g01010 LOC_Os10g27340 LOC_Os07g14340 LOC_Os10g31420 LOC_Os03g01320 LOC_Os06g10870 LOC_Os10g31440 LOC_Os03g58890 LOC_Os03g07000 LOC_Os06g09870 More.. |
| Downstream Genes | LOC_Os11g09280 LOC_Os10g35470 LOC_Os12g39980 LOC_Os12g13890 LOC_Os10g31500 LOC_Os10g31670 LOC_Os10g31740 LOC_Os10g31710 LOC_Os10g31660 LOC_Os10g31540 LOC_Os10g31720 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 osa-miR1853-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g31490.1 |
| Rice Genome Annotation | LOC_Os10g31490.1 |
| Ricechip | LOC_Os10g31490.1 |