RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g31820.1 View Network Show in Genome Browser |
| Other Names | Os10g0456500 |
| Description | fluG, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 16686826-16693186 Nucleotide Length: 2538 |
| Protein-coding | LOC_Os10g31820 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g56400 LOC_Os02g50240 LOC_Os04g32150 LOC_Os03g50490 LOC_Os03g12290 LOC_Os06g51350 LOC_Os03g24440 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00250 rn00330 rn00630 rn00910 rn01100 rn01120 |
| Metacyc Pathways | PWY-381 GLNSYN-PWY PWY-3282 PWY-6549 PWY-5675 PWY490-3 TRYPTOPHAN-DEGRADATION-1 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g31820.1 |
| Rice Genome Annotation | LOC_Os10g31820.1 |
| Ricechip | LOC_Os10g31820.1 |
| KEGG | osa:4348794 dosa:Os10t0456500-02 |
| Entrez-Gene | 4348794 |