RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g31830.1 View Network Show in Genome Browser |
| Other Names | Os10g0456600,Os10g0456550 |
| Description | ras-related protein, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 16693205-16697515 Nucleotide Length: 669 |
| Protein-coding | LOC_Os10g31830 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g43690 LOC_Os01g08450 LOC_Os01g37800 LOC_Os05g01490 LOC_Os02g28810 LOC_Os02g57150 LOC_Os01g25610 LOC_Os08g02410 LOC_Os02g01560 LOC_Os04g28180 LOC_Os08g02400 More.. |
| Downstream Genes | LOC_Os11g45590 LOC_Os11g41820 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g31830.1 |
| Rice Genome Annotation | LOC_Os10g31830.1 |
| Ricechip | LOC_Os10g31830.1 |
| KEGG | osa:4348795 dosa:Os10t0456600-01dosa:Os10t0456550-00 |
| Entrez-Gene | 4348795 |