RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g31900.1 View Network Show in Genome Browser |
| Other Names | Os10g0457000 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 16750745-16755237 Nucleotide Length: 1068 |
| Protein-coding | LOC_Os10g31900 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g04480 LOC_Os02g58090 LOC_Os03g17010 LOC_Os02g05310 LOC_Os07g22220 LOC_Os05g30410 LOC_Os04g56760 LOC_Os09g21770 LOC_Os01g72890 LOC_Os03g13760 LOC_Os02g01250 More.. |
| Downstream Genes | LOC_Os10g34520 LOC_Os10g35550 LOC_Os12g18880 LOC_Os11g43620 LOC_Os11g08940 LOC_Os12g37370 LOC_Os12g44390 LOC_Os10g34380 LOC_Os11g41820 LOC_Os11g14430 LOC_Os11g07490 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g31900.1 |
| Rice Genome Annotation | LOC_Os10g31900.1 |
| Ricechip | LOC_Os10g31900.1 |
| KEGG | osa:4348798 dosa:Os10t0457000-01 |
| Entrez-Gene | 4348798 |