RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g31940.1 View Network Show in Genome Browser |
| Other Names | Os10g0457500 |
| Description | inosine triphosphate pyrophosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 16768464-16771729 Nucleotide Length: 381 |
| Protein-coding | LOC_Os10g31940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os09g07820 LOC_Os06g37180 LOC_Os01g51380 LOC_Os08g25090 LOC_Os09g11250 LOC_Os07g44630 LOC_Os02g16550 LOC_Os05g10630 LOC_Os08g02360 LOC_Os03g62720 LOC_Os07g07020 More.. |
| Downstream Genes | LOC_Os12g17070 LOC_Os12g21500 LOC_Os12g31380 LOC_Os11g03794 LOC_Os10g41450 LOC_Os12g03540 LOC_Os12g40130 LOC_Os12g07720 LOC_Os11g26030 LOC_Os10g41960 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00240 rn01100 rn00230 rn00983 |
| Metacyc Pathways | PWY0-166 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g31940.1 |
| Rice Genome Annotation | LOC_Os10g31940.1 |
| Ricechip | LOC_Os10g31940.1 |
| KEGG | osa:4348803 dosa:Os10t0457500-01 |
| Entrez-Gene | 4348803 |