RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g32550.1 View Network Show in Genome Browser |
| Other Names | Os10g0462900 |
| Description | T-complex protein, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 17048041-17053445 Nucleotide Length: 1905 |
| Protein-coding | LOC_Os10g32550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g25050 LOC_Os07g44740 LOC_Os06g09679 LOC_Os02g54060 LOC_Os06g09688 LOC_Os09g26730 LOC_Os03g22880 LOC_Os05g08360 LOC_Os01g67134 LOC_Os02g57590 LOC_Os04g02820 More.. |
| Downstream Genes | LOC_Os10g41710 LOC_Os11g04070 LOC_Os12g03880 LOC_Os12g19590 LOC_Os12g38000 LOC_Os12g38310 LOC_Os10g41410 LOC_Os11g11390 LOC_Os11g14220 LOC_Os11g41610 LOC_Os10g32920 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g32550.1 |
| Rice Genome Annotation | LOC_Os10g32550.1 |
| Ricechip | LOC_Os10g32550.1 |
| KEGG | osa:4348824 dosa:Os10t0462900-01 |
| Entrez-Gene | 4348824 |