RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g32960.1 View Network Show in Genome Browser |
| Other Names | Os10g0467200 |
| Description | peroxisome assembly protein 12, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 17250766-17255665 Nucleotide Length: 1185 |
| Protein-coding | LOC_Os10g32960 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g41800 LOC_Os05g19480 LOC_Os08g39080 LOC_Os03g57210 LOC_Os02g44220 LOC_Os07g05810 LOC_Os08g41730 LOC_Os08g44240 LOC_Os09g32800 LOC_Os04g35060 LOC_Os01g43030 More.. |
| Downstream Genes | LOC_Os12g04290 LOC_Os11g04520 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g32960.1 |
| Rice Genome Annotation | LOC_Os10g32960.1 |
| Ricechip | LOC_Os10g32960.1 |
| KEGG | osa:4348849 dosa:Os10t0467200-01 |
| Entrez-Gene | 4348849 |