RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g32980.1 View Network Show in Genome Browser |
| Other Names | Os10g0467800 |
| Description | CESA7 - cellulose synthase, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 17261952-17266613 Nucleotide Length: 3192 |
| Protein-coding | LOC_Os10g32980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g54620 LOC_Os09g25490 LOC_Os04g33450 LOC_Os01g02010 LOC_Os04g28990 LOC_Os10g16974 LOC_Os08g24750 LOC_Os01g63540 LOC_Os03g16610 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 osa-miR5340 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00500 |
| Metacyc Pathways | PWY-1001 |
| Reference | |
|---|---|
| PubMed | 12970476 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g32980.1 |
| Rice Genome Annotation | LOC_Os10g32980.1 |
| Ricechip | LOC_Os10g32980.1 |
| KEGG | osa:4348853 dosa:Os10t0467800-01 |
| Entrez-Gene | 4348853 |