RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os10g33060.1 View Network Show in Genome Browser
Other Names	Os10g0468875,Os10g0468800
Description	hcr2-5D, putative, expressed
Gene Attributes	Chromosome: Chr10 CDS Coordinates (5'-3'): 17320261-17322239 Nucleotide Length: 1608
Protein-coding	LOC_Os10g33060

Gene Ontology Classification
GO	Name	Type	Code
GO:0009987	cellular process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0006464	protein modification process	Biological Process	IEA
GO:0006464	protein modification process	Biological Process	IEA
GO:0016301	kinase activity	Molecular Function	IEA
GO:0016301	kinase activity	Molecular Function	IEA
GO:0005575	cellular_component	Cellular Component	IEA
GO:0005575	cellular_component	Cellular Component	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0005886	plasma membrane	Cellular Component	IEA
GO:0005886	plasma membrane	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os08g09640 LOC_Os06g38730 LOC_Os03g46600 LOC_Os06g38930 LOC_Os06g38670 LOC_Os02g11980 LOC_Os08g09450 LOC_Os02g01800 LOC_Os06g38650 LOC_Os06g38590 LOC_Os06g38780 More..
Downstream Genes	LOC_Os11g41100 LOC_Os11g36090 LOC_Os11g36150 LOC_Os11g36140 LOC_Os12g42520 LOC_Os11g36160 LOC_Os11g36180 LOC_Os11g07100 LOC_Os11g29790 LOC_Os11g35500 LOC_Os11g07230 More..

miRNA Regulations
miRNAs	osa-miR1879

Database Links
Gramene	LOC_Os10g33060.1
Rice Genome Annotation	LOC_Os10g33060.1
Ricechip	LOC_Os10g33060.1
KEGG	osa:4348858 dosa:Os10t0468800-00