RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g33420.1 View Network Show in Genome Browser |
| Other Names | Os10g0473400 |
| Description | non-lysosomal glucosylceramidase, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 17584939-17592299 Nucleotide Length: 2865 |
| Protein-coding | LOC_Os10g33420 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g17780 LOC_Os09g31970 LOC_Os08g40180 LOC_Os05g48820 LOC_Os01g48170 LOC_Os01g48180 LOC_Os10g02970 LOC_Os03g57310 LOC_Os05g23610 LOC_Os02g49800 LOC_Os05g47770 More.. |
| Downstream Genes | LOC_Os12g04220 LOC_Os11g04460 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g33420.1 |
| Rice Genome Annotation | LOC_Os10g33420.1 |
| Ricechip | LOC_Os10g33420.1 |
| KEGG | osa:4348876 dosa:Os10t0473400-01 |
| Entrez-Gene | 4348876 |