RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g33800.3 View Network Show in Genome Browser |
| Other Names | Os10g0478200 |
| Description | lactate/malate dehydrogenase, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 17913818-17917850 Nucleotide Length: 660 |
| Protein-coding | LOC_Os10g33800 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g46070 LOC_Os02g01510 LOC_Os05g49880 LOC_Os02g07490 LOC_Os01g22520 LOC_Os03g50540 LOC_Os05g06750 LOC_Os01g74000 LOC_Os08g16480 LOC_Os03g63500 LOC_Os06g43850 More.. |
| Downstream Genes | LOC_Os12g43630 LOC_Os11g26850 LOC_Os11g33240 LOC_Os10g42840 LOC_Os11g40140 LOC_Os11g05570 LOC_Os11g47760 LOC_Os11g43900 LOC_Os11g05290 LOC_Os12g29990 LOC_Os12g37650 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g33800.3 |
| Rice Genome Annotation | LOC_Os10g33800.3 |
| Ricechip | LOC_Os10g33800.3 |
| KEGG | osa:4348905 dosa:Os10t0478200-01 |
| Entrez-Gene | 4348905 |