RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g33930.1 View Network Show in Genome Browser |
| Other Names | Os10g0479800 |
| Description | DUF1336 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 18036547-18040810 Nucleotide Length: 1239 |
| Protein-coding | LOC_Os10g33930 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0008289 | lipid binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g51710 LOC_Os03g46340 LOC_Os03g49770 LOC_Os01g63800 LOC_Os09g33600 LOC_Os05g29050 LOC_Os02g50550 LOC_Os03g24180 LOC_Os02g42134 LOC_Os04g53540 LOC_Os02g45250 More.. |
| Downstream Genes | LOC_Os12g18770 LOC_Os10g33960 LOC_Os10g42490 LOC_Os10g41060 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g33930.1 |
| Rice Genome Annotation | LOC_Os10g33930.1 |
| Ricechip | LOC_Os10g33930.1 |
| KEGG | osa:4348917 dosa:Os10t0479800-01 |
| Entrez-Gene | 4348917 |