RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g34040.1 View Network Show in Genome Browser |
| Other Names | Os10g0481500 |
| Description | nodulin, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 18169102-18172316 Nucleotide Length: 1458 |
| Protein-coding | LOC_Os10g34040 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os09g04339 LOC_Os03g15770 LOC_Os07g48244 LOC_Os05g37980 LOC_Os03g30790 LOC_Os05g32580 LOC_Os02g37000 LOC_Os04g38900 LOC_Os01g38980 LOC_Os04g58090 LOC_Os01g45760 More.. |
| Downstream Genes | LOC_Os10g34150 LOC_Os10g34130 LOC_Os12g33100 LOC_Os12g25720 LOC_Os10g35560 LOC_Os11g37920 LOC_Os12g06670 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g34040.1 |
| Rice Genome Annotation | LOC_Os10g34040.1 |
| Ricechip | LOC_Os10g34040.1 |
| KEGG | osa:4348926 dosa:Os10t0481500-00 |
| Entrez-Gene | 4348926 |