RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g34180.1 View Network Show in Genome Browser |
| Other Names | Os10g0483000 |
| Description | transcription factor BTF3, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 18240457-18243440 Nucleotide Length: 495 |
| Protein-coding | LOC_Os10g34180 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g40820 LOC_Os03g02960 LOC_Os01g59990 LOC_Os01g71230 LOC_Os07g12250 LOC_Os02g27760 LOC_Os07g10720 LOC_Os03g18570 LOC_Os03g18580 LOC_Os07g41750 LOC_Os09g32976 More.. |
| Downstream Genes | LOC_Os11g03400 LOC_Os12g03090 LOC_Os12g17910 LOC_Os11g29190 LOC_Os11g41610 LOC_Os11g05562 LOC_Os11g11390 LOC_Os10g41470 LOC_Os12g07010 LOC_Os11g06750 LOC_Os10g41520 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g34180.1 |
| Rice Genome Annotation | LOC_Os10g34180.1 |
| Ricechip | LOC_Os10g34180.1 |
| KEGG | osa:4348929 dosa:Os10t0483000-01 |
| Entrez-Gene | 4348929 |