RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g34420.1 View Network Show in Genome Browser |
| Other Names | Os10g0485500 |
| Description | lysM domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 18357335-18359936 Nucleotide Length: 1107 |
| Protein-coding | LOC_Os10g34420 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os09g37600 LOC_Os06g10660 LOC_Os02g09960 LOC_Os01g53840 LOC_Os08g42580 LOC_Os02g53000 LOC_Os06g11790 LOC_Os02g51770 LOC_Os01g72880 LOC_Os09g37930 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR531b osa-miR2919 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g34420.1 |
| Rice Genome Annotation | LOC_Os10g34420.1 |
| Ricechip | LOC_Os10g34420.1 |
| KEGG | osa:4348943 dosa:Os10t0485500-01 |
| Entrez-Gene | 4348943 |