RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g34670.2 View Network Show in Genome Browser |
| Other Names | Os10g0488100 |
| Description | prefoldin, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 18475023-18484878 Nucleotide Length: 375 |
| Protein-coding | LOC_Os10g34670 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g38520 LOC_Os01g62350 LOC_Os02g14860 LOC_Os03g43020 LOC_Os05g40820 LOC_Os02g47140 LOC_Os07g12250 LOC_Os04g50990 LOC_Os09g31180 LOC_Os03g02960 LOC_Os01g59990 More.. |
| Downstream Genes | LOC_Os12g37590 LOC_Os12g30060 LOC_Os11g36050 LOC_Os12g03880 LOC_Os11g05562 LOC_Os11g04070 LOC_Os12g03090 LOC_Os11g03400 LOC_Os11g10100 LOC_Os11g14220 LOC_Os12g02730 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5532 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g34670.2 |
| Rice Genome Annotation | LOC_Os10g34670.2 |
| Ricechip | LOC_Os10g34670.2 |
| KEGG | osa:4348957 dosa:Os10t0488100-01 |
| Entrez-Gene | 4348957 |