RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os10g34680.1 View Network Show in Genome Browser
Other Names	Os10g0488300
Description	vacuolar protein sorting-associated protein 52, putative, expressed
Gene Attributes	Chromosome: Chr10 CDS Coordinates (5'-3'): 18486477-18496730 Nucleotide Length: 2073
Protein-coding	LOC_Os10g34680

Gene Ontology Classification
GO	Name	Type	Code
GO:0009653	anatomical structure morphogenesis	Biological Process	IEA
GO:0030154	cell differentiation	Biological Process	IEA
GO:0016049	cell growth	Biological Process	IEA
GO:0016043	cellular component organization	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0009856	pollination	Biological Process	IEA
GO:0000003	reproduction	Biological Process	IEA
GO:0003674	molecular_function	Molecular Function	IEA
GO:0005623	cell	Cellular Component	IEA
GO:0005794	Golgi apparatus	Cellular Component	IEA
GO:0016020	membrane	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os04g13470 LOC_Os01g73230 LOC_Os07g31370 LOC_Os03g09140 LOC_Os01g59800 LOC_Os01g73310 LOC_Os05g01600 LOC_Os01g46932 LOC_Os03g61970 LOC_Os03g22870 LOC_Os01g11300 More..
Downstream Genes	LOC_Os11g01380 LOC_Os12g01390 LOC_Os11g06740 LOC_Os11g06390 LOC_Os10g36650 LOC_Os11g43640 LOC_Os12g37360 LOC_Os11g20384 LOC_Os11g48020 LOC_Os11g10100 LOC_Os12g43600 More..

Database Links
Gramene	LOC_Os10g34680.1
Rice Genome Annotation	LOC_Os10g34680.1
Ricechip	LOC_Os10g34680.1
KEGG	osa:4348958 dosa:Os10t0488300-01
Entrez-Gene	4348958