RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g35170.1 View Network Show in Genome Browser |
| Other Names | Os10g0494200 |
| Description | semialdehyde dehydrogenase, NAD binding domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 18773359-18777132 Nucleotide Length: 1332 |
| Protein-coding | LOC_Os10g35170 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g44000 LOC_Os03g17120 LOC_Os03g55280 LOC_Os04g46460 LOC_Os07g27780 LOC_Os02g47590 LOC_Os07g20544 LOC_Os05g03830 LOC_Os07g39690 LOC_Os03g31690 LOC_Os03g63330 More.. |
| Downstream Genes | LOC_Os12g13320 LOC_Os12g04440 LOC_Os11g04670 LOC_Os11g19770 LOC_Os12g03090 LOC_Os11g03400 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00300 rn01100 rn01110 rn01120 rn00330 rn01210 rn00260 rn00270 |
| Metacyc Pathways | DAPLYSINESYN-PWY PWY-5097 PWY-2941 ARGSYNBSUB-PWY GLUTORN-PWY HOMOSERSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g35170.1 |
| Rice Genome Annotation | LOC_Os10g35170.1 |
| Ricechip | LOC_Os10g35170.1 |
| KEGG | osa:4348992 dosa:Os10t0494200-00 |
| Entrez-Gene | 4348992 |