RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g35180.1 View Network Show in Genome Browser |
| Other Names | Os10g0494300 |
| Description | white-brown complex homolog protein 11, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 18784685-18791044 Nucleotide Length: 2172 |
| Protein-coding | LOC_Os10g35180 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g03540 LOC_Os09g35730 LOC_Os01g37630 LOC_Os01g21990 LOC_Os06g03560 LOC_Os08g43320 LOC_Os06g42850 LOC_Os04g58620 LOC_Os01g25360 LOC_Os06g03700 LOC_Os03g60710 More.. |
| Downstream Genes | LOC_Os11g47730 LOC_Os12g32970 LOC_Os12g37650 LOC_Os12g05080 LOC_Os11g05080 LOC_Os12g02120 LOC_Os11g02180 LOC_Os11g40249 LOC_Os12g10510 LOC_Os12g35670 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g35180.1 |
| Rice Genome Annotation | LOC_Os10g35180.1 |
| Ricechip | LOC_Os10g35180.1 |
| KEGG | osa:4348993 dosa:Os10t0494300-01 |
| Entrez-Gene | 4348993 |