RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g35250.1 View Network Show in Genome Browser |
| Other Names | Os10g0495300 |
| Description | vacuolar protein-sorting protein bro1, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 18837730-18843204 Nucleotide Length: 2652 |
| Protein-coding | LOC_Os10g35250 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os09g09480 LOC_Os10g02630 LOC_Os04g45670 LOC_Os06g40620 LOC_Os02g58640 LOC_Os02g06490 LOC_Os08g08820 LOC_Os08g04190 LOC_Os07g32460 LOC_Os04g53540 LOC_Os01g04840 More.. |
| Downstream Genes | LOC_Os10g36870 LOC_Os12g02830 LOC_Os11g03060 LOC_Os10g42490 LOC_Os11g32240 LOC_Os12g30540 LOC_Os10g41960 LOC_Os12g06670 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00790 rn01100 |
| Metacyc Pathways | FOLSYN-PWY PWY-3742 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g35250.1 |
| Rice Genome Annotation | LOC_Os10g35250.1 |
| Ricechip | LOC_Os10g35250.1 |
| KEGG | osa:4348999 dosa:Os10t0495300-01 |
| Entrez-Gene | 4348999 |