RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g35290.1 View Network Show in Genome Browser |
| Other Names | Os10g0495600 |
| Description | DNA-directed RNA polymerase I subunit RPA2, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 18857786-18867383 Nucleotide Length: 3108 |
| Protein-coding | LOC_Os10g35290 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g18410 LOC_Os04g41490 LOC_Os01g59140 LOC_Os05g05860 LOC_Os01g73430 LOC_Os02g05880 LOC_Os04g46310 LOC_Os04g16830 LOC_Os02g24614 LOC_Os03g52400 LOC_Os05g49320 More.. |
| Downstream Genes | LOC_Os11g07500 LOC_Os12g09280 LOC_Os12g01710 LOC_Os11g29190 LOC_Os11g08940 LOC_Os12g07300 LOC_Os11g19250 LOC_Os12g03720 LOC_Os11g03900 LOC_Os12g36950 LOC_Os11g08569 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g35290.1 |
| Rice Genome Annotation | LOC_Os10g35290.1 |
| Ricechip | LOC_Os10g35290.1 |
| KEGG | osa:9270457 dosa:Os10t0495600-01 |
| Entrez-Gene | 9270457 |