RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g35370.1 View Network Show in Genome Browser |
| Other Names | Os10g0496900 |
| Description | oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 18900290-18904022 Nucleotide Length: 1209 |
| Protein-coding | LOC_Os10g35370 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g39960 LOC_Os08g37130 LOC_Os07g48640 LOC_Os07g37420 LOC_Os06g08600 LOC_Os05g04870 LOC_Os04g52400 LOC_Os04g44950 LOC_Os04g38420 LOC_Os04g30760 LOC_Os03g62590 More.. |
| Downstream Genes | LOC_Os12g41590 LOC_Os12g27830 LOC_Os11g32030 LOC_Os11g24484 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00860 rn01100 rn01110 |
| Metacyc Pathways | ENTBACSYN-PWY |
| Reference | |
|---|---|
| PubMed | 23289852 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g35370.1 |
| Rice Genome Annotation | LOC_Os10g35370.1 |
| Ricechip | LOC_Os10g35370.1 |
| KEGG | osa:4349004 dosa:Os10t0496900-01 |
| Entrez-Gene | 4349004 |