RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g35690.1 View Network Show in Genome Browser |
| Other Names | Os10g0500500 |
| Description | ribosomal protein S18 containing protein, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 19084294-19087665 Nucleotide Length: 825 |
| Protein-coding | LOC_Os10g35690 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g57670 LOC_Os05g45270 LOC_Os03g62630 LOC_Os02g13870 LOC_Os03g58050 LOC_Os01g62440 LOC_Os03g18590 LOC_Os03g10460 LOC_Os03g49220 LOC_Os02g51780 LOC_Os03g07840 More.. |
| Downstream Genes | LOC_Os12g37610 LOC_Os11g36050 LOC_Os11g31900 LOC_Os12g34890 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR415 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g35690.1 |
| Rice Genome Annotation | LOC_Os10g35690.1 |
| Ricechip | LOC_Os10g35690.1 |
| KEGG | osa:4349032 dosa:Os10t0500500-01 |
| Entrez-Gene | 4349032 |