RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g35940.1 View Network Show in Genome Browser |
| Other Names | Os10g0503200 |
| Description | folylpolyglutamate synthetase, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 19201521-19206783 Nucleotide Length: 1734 |
| Protein-coding | LOC_Os10g35940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0040007 | growth | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g58320 LOC_Os03g58290 LOC_Os03g58300 LOC_Os07g08430 LOC_Os02g16630 LOC_Os08g04180 LOC_Os03g58260 LOC_Os03g21740 LOC_Os07g06940 LOC_Os04g43650 LOC_Os03g52840 More.. |
| Downstream Genes | LOC_Os10g36210 LOC_Os12g09290 LOC_Os12g19530 LOC_Os10g41930 LOC_Os10g41410 LOC_Os11g47800 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00790 rn01100 |
| Metacyc Pathways | 1CMET2-PWY PWY-3841 PWY-2161 PWY-3742 PWY-2161B |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g35940.1 |
| Rice Genome Annotation | LOC_Os10g35940.1 |
| Ricechip | LOC_Os10g35940.1 |
| KEGG | osa:4349049 dosa:Os10t0503200-01 |
| Entrez-Gene | 4349049 |