RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g36250.1 View Network Show in Genome Browser |
| Other Names | Os10g0506800 |
| Description | tetratricopeptide repeat, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 19374119-19379513 Nucleotide Length: 2382 |
| Protein-coding | LOC_Os10g36250 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g13370 LOC_Os07g29360 LOC_Os05g27870 LOC_Os05g01310 LOC_Os07g27180 LOC_Os10g32300 LOC_Os09g36740 LOC_Os07g49000 LOC_Os07g06710 LOC_Os03g22140 LOC_Os03g19200 More.. |
| Downstream Genes | LOC_Os11g05090 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR172a osa-miR172d-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g36250.1 |
| Rice Genome Annotation | LOC_Os10g36250.1 |
| Ricechip | LOC_Os10g36250.1 |
| KEGG | osa:4349066 dosa:Os10t0506800-01 |
| Entrez-Gene | 4349066 |