RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g36530.1 View Network Show in Genome Browser |
| Other Names | Os10g0509000 |
| Description | mutS domain V family protein, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 19541307-19549097 Nucleotide Length: 1653 |
| Protein-coding | LOC_Os10g36530 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g24390 LOC_Os02g50560 LOC_Os02g46750 LOC_Os03g52640 LOC_Os05g25400 LOC_Os07g29410 LOC_Os08g15460 LOC_Os05g48510 |
| Downstream Genes | LOC_Os11g37130 LOC_Os11g13420 LOC_Os11g41910 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g36530.1 |
| Rice Genome Annotation | LOC_Os10g36530.1 |
| Ricechip | LOC_Os10g36530.1 |
| KEGG | osa:4349080 dosa:Os10t0509000-01 |
| Entrez-Gene | 4349080 |