RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g37180.1 View Network Show in Genome Browser |
| Other Names | Os10g0516100 |
| Description | glycine cleavage system H protein, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 19894708-19896859 Nucleotide Length: 495 |
| Protein-coding | LOC_Os10g37180 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g53230 LOC_Os01g51410 LOC_Os06g40940 LOC_Os04g32330 LOC_Os06g30460 LOC_Os08g33440 LOC_Os02g58790 LOC_Os06g49160 LOC_Os06g01630 LOC_Os02g02810 LOC_Os06g01850 More.. |
| Downstream Genes | LOC_Os12g08170 LOC_Os12g23180 LOC_Os12g26030 LOC_Os12g37640 |
| Pathways | |
|---|---|
| Metacyc Pathways | GLYCLEAV-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g37180.1 |
| Rice Genome Annotation | LOC_Os10g37180.1 |
| Ricechip | LOC_Os10g37180.1 |
| KEGG | osa:4349114 dosa:Os10t0516100-01 |
| Entrez-Gene | 4349114 |