RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g37420.2 View Network Show in Genome Browser |
| Other Names | Os10g0518200 |
| Description | cytochrome b5-like Heme/Steroid binding domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 20028682-20031250 Nucleotide Length: 405 |
| Protein-coding | LOC_Os10g37420 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g11300 LOC_Os05g34770 LOC_Os08g40180 LOC_Os01g11340 LOC_Os03g29170 LOC_Os01g04260 LOC_Os01g11270 LOC_Os01g11280 LOC_Os07g10600 LOC_Os08g43170 LOC_Os09g31970 More.. |
| Downstream Genes | LOC_Os12g43670 LOC_Os11g32240 LOC_Os12g32240 LOC_Os12g09280 LOC_Os11g08569 LOC_Os12g31840 LOC_Os11g18880 LOC_Os11g18194 LOC_Os11g35710 LOC_Os12g32640 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5511 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g37420.2 |
| Rice Genome Annotation | LOC_Os10g37420.2 |
| Ricechip | LOC_Os10g37420.2 |
| KEGG | osa:4349127 dosa:Os10t0518200-01 |
| Entrez-Gene | 4349127 |