RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g37490.1 View Network Show in Genome Browser |
| Other Names | Os10g0518900 |
| Description | DNA excision repair protein ERCC-1, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 20070718-20074175 Nucleotide Length: 1164 |
| Protein-coding | LOC_Os10g37490 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g01100 LOC_Os05g19270 LOC_Os05g51060 LOC_Os02g40450 LOC_Os08g33082 LOC_Os01g71960 LOC_Os04g58630 LOC_Os01g57110 LOC_Os08g35700 LOC_Os07g43060 LOC_Os05g05260 More.. |
| Downstream Genes | LOC_Os12g37370 LOC_Os11g08940 LOC_Os11g28350 LOC_Os11g08330 LOC_Os12g07720 LOC_Os11g36390 LOC_Os11g16580 LOC_Os11g40150 LOC_Os11g04954 LOC_Os12g04980 LOC_Os12g10850 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g37490.1 |
| Rice Genome Annotation | LOC_Os10g37490.1 |
| Ricechip | LOC_Os10g37490.1 |
| KEGG | osa:4349131 dosa:Os10t0518900-01 |
| Entrez-Gene | 4349131 |