RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g37740.1 View Network Show in Genome Browser |
| Other Names | Os10g0521700 |
| Description | CGMC_GSK.9 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 20196581-20201332 Nucleotide Length: 1410 |
| Protein-coding | LOC_Os10g37740 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05630 LOC_Os06g33549 LOC_Os04g37904 LOC_Os06g48300 LOC_Os06g05660 LOC_Os07g32380 LOC_Os04g56450 LOC_Os02g55560 LOC_Os04g52000 LOC_Os02g15594 LOC_Os06g33530 More.. |
| Downstream Genes | LOC_Os12g41180 LOC_Os10g39540 LOC_Os12g19290 LOC_Os10g38950 LOC_Os12g06670 LOC_Os11g13820 LOC_Os11g20384 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5338 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00760 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g37740.1 |
| Rice Genome Annotation | LOC_Os10g37740.1 |
| Ricechip | LOC_Os10g37740.1 |
| KEGG | osa:4349147 dosa:Os10t0521700-01 |
| Entrez-Gene | 4349147 |