RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g37980.1 View Network Show in Genome Browser |
| Other Names | Os10g0523700 |
| Description | prephenate dehydratase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 20344995-20347004 Nucleotide Length: 1227 |
| Protein-coding | LOC_Os10g37980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g42370 LOC_Os03g06200 LOC_Os06g04280 LOC_Os06g35050 LOC_Os07g01820 LOC_Os01g40640 LOC_Os02g02390 LOC_Os03g54160 LOC_Os02g47940 LOC_Os05g48750 LOC_Os05g45920 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn01110 rn01100 rn00400 |
| Metacyc Pathways | PHESYN PWY-3462 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g37980.1 |
| Rice Genome Annotation | LOC_Os10g37980.1 |
| Ricechip | LOC_Os10g37980.1 |
| KEGG | osa:4349157 dosa:Os10t0523700-01 |
| Entrez-Gene | 4349157 |