RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g38060.1 View Network Show in Genome Browser |
| Other Names | Os10g0524400 |
| Description | phospholipase D, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 20377195-20380235 Nucleotide Length: 3141 |
| Protein-coding | LOC_Os10g38060 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0008289 | lipid binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g26690 LOC_Os07g26630 LOC_Os04g44060 LOC_Os02g41860 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00565 rn00564 rn01100 |
| Metacyc Pathways | PWY-3561 LIPASYN-PWY |
| Reference | |
|---|---|
| PubMed | 19286937 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g38060.1 |
| Rice Genome Annotation | LOC_Os10g38060.1 |
| Ricechip | LOC_Os10g38060.1 |
| KEGG | osa:4349161 dosa:Os10t0524400-01 |
| Entrez-Gene | 4349161 |