RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g38670.1 View Network Show in Genome Browser |
| Other Names | Os10g0530200 |
| Description | glutathione S-transferase, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 20610080-20611336 Nucleotide Length: 708 |
| Protein-coding | LOC_Os10g38670 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g32950 LOC_Os02g07490 LOC_Os02g14000 LOC_Os10g08550 LOC_Os06g04510 LOC_Os04g32710 LOC_Os04g27860 LOC_Os02g27769 LOC_Os01g58680 LOC_Os07g09310 LOC_Os05g19370 More.. |
| Downstream Genes | LOC_Os11g42350 LOC_Os12g40710 LOC_Os11g37730 LOC_Os12g34380 LOC_Os11g14220 LOC_Os12g40730 LOC_Os12g16200 LOC_Os11g40140 LOC_Os11g11390 LOC_Os11g29190 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g38670.1 |
| Rice Genome Annotation | LOC_Os10g38670.1 |
| Ricechip | LOC_Os10g38670.1 |
| KEGG | osa:4349200 dosa:Os10t0530200-01 |
| Entrez-Gene | 4349200 |