RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g38940.1 View Network Show in Genome Browser |
| Other Names | Os10g0533500 |
| Description | fatty acid hydroxylase, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 20744421-20746446 Nucleotide Length: 879 |
| Protein-coding | LOC_Os10g38940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os10g37660 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00940 rn01110 rn01100 rn00130 rn00360 rn00941 rn00945 rn00380 rn00905 |
| Metacyc Pathways | PWY-581 PWY-2181 PWY-2582 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g38940.1 |
| Rice Genome Annotation | LOC_Os10g38940.1 |
| Ricechip | LOC_Os10g38940.1 |
| KEGG | osa:4349224 dosa:Os10t0533500-00 |
| Entrez-Gene | 4349224 |