RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g38980.1 View Network Show in Genome Browser |
| Other Names | Os10g0534100 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 20779553-20783595 Nucleotide Length: 1422 |
| Protein-coding | LOC_Os10g38980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g07760 LOC_Os06g40450 LOC_Os03g59580 LOC_Os07g38590 LOC_Os04g36620 LOC_Os02g57640 LOC_Os05g41910 LOC_Os06g48534 LOC_Os03g50320 LOC_Os01g36229 LOC_Os02g16880 More.. |
| Downstream Genes | LOC_Os12g01170 LOC_Os11g01170 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g38980.1 |
| Rice Genome Annotation | LOC_Os10g38980.1 |
| Ricechip | LOC_Os10g38980.1 |
| KEGG | osa:4349228 dosa:Os10t0534100-02 |
| Entrez-Gene | 4349228 |