RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g39090.1 View Network Show in Genome Browser |
| Other Names | Os10g0535600 |
| Description | hydrolase, alpha/beta fold family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 20837434-20839015 Nucleotide Length: 660 |
| Protein-coding | LOC_Os10g39090 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007154 | cell communication | Biological Process | IEA | |
| GO:0009991 | response to extracellular stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g08440 LOC_Os02g53750 LOC_Os03g17700 LOC_Os01g61080 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR529a |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g39090.1 |
| Rice Genome Annotation | LOC_Os10g39090.1 |
| Ricechip | LOC_Os10g39090.1 |
| KEGG | osa:4349234 dosa:Os10t0535600-01 |
| Entrez-Gene | 4349234 |