RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g39170.1 View Network Show in Genome Browser |
| Other Names | Os10g0536700 |
| Description | peroxidase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 20900132-20902342 Nucleotide Length: 1017 |
| Protein-coding | LOC_Os10g39170 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g31410 LOC_Os06g44280 LOC_Os03g17760 LOC_Os06g47320 LOC_Os06g36700 LOC_Os05g05470 LOC_Os04g46620 LOC_Os02g22780 LOC_Os02g14929 LOC_Os03g42220 LOC_Os03g59020 More.. |
| Downstream Genes | LOC_Os11g35350 LOC_Os12g32380 LOC_Os11g41610 LOC_Os11g14010 |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-5461 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g39170.1 |
| Rice Genome Annotation | LOC_Os10g39170.1 |
| Ricechip | LOC_Os10g39170.1 |
| KEGG | osa:4349241 dosa:Os10t0536700-01 |
| Entrez-Gene | 4349241 |