RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os10g39420.1 View Network Show in Genome Browser
Other Names	Os10g0539600
Description	CAMK_CAMK_like.8 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
Gene Attributes	Chromosome: Chr10 CDS Coordinates (5'-3'): 21027454-21032225 Nucleotide Length: 1605
Protein-coding	LOC_Os10g39420

Gene Ontology Classification
GO	Name	Type	Code
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0006464	protein modification process	Biological Process	IEA
GO:0009719	response to endogenous stimulus	Biological Process	IEA
GO:0007165	signal transduction	Biological Process	IEA
GO:0006810	transport	Biological Process	IEA
GO:0016301	kinase activity	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0005829	cytosol	Cellular Component	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0005886	plasma membrane	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os02g05630 LOC_Os06g48300 LOC_Os01g51010 LOC_Os05g48030 LOC_Os04g56450 LOC_Os06g33549 LOC_Os07g32380 LOC_Os04g37904 LOC_Os02g15594 LOC_Os06g33530 LOC_Os02g55560 More..
Downstream Genes	LOC_Os10g39540 LOC_Os11g03430 LOC_Os12g03130 LOC_Os11g48090 LOC_Os12g28260 LOC_Os12g06570 LOC_Os12g06910 LOC_Os12g38110 LOC_Os11g13820 LOC_Os12g31000 LOC_Os12g33100 More..

Reference
PubMed	11910009

Database Links
Gramene	LOC_Os10g39420.1
Rice Genome Annotation	LOC_Os10g39420.1
Ricechip	LOC_Os10g39420.1
KEGG	osa:4349249 dosa:Os10t0539600-01
Entrez-Gene	4349249