RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g39440.1 View Network Show in Genome Browser |
| Other Names | Os10g0539900 |
| Description | transporter family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 21048271-21052794 Nucleotide Length: 2223 |
| Protein-coding | LOC_Os10g39440 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g48780 LOC_Os03g63920 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Reference | |
|---|---|
| PubMed | 20202129 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g39440.1 |
| Rice Genome Annotation | LOC_Os10g39440.1 |
| Ricechip | LOC_Os10g39440.1 |
| KEGG | osa:4349251 dosa:Os10t0539900-01 |
| Entrez-Gene | 4349251 |