RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g39540.1 View Network Show in Genome Browser |
| Other Names | Os10g0541200 |
| Description | protein phosphatase 2C, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 21126202-21129813 Nucleotide Length: 990 |
| Protein-coding | LOC_Os10g39540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os10g33650 LOC_Os03g49750 LOC_Os01g38950 LOC_Os01g51200 LOC_Os03g51020 LOC_Os01g26280 LOC_Os03g05470 LOC_Os06g49170 LOC_Os04g42700 LOC_Os10g35450 LOC_Os03g21730 More.. |
| Downstream Genes | LOC_Os12g03810 LOC_Os11g03970 LOC_Os12g38860 LOC_Os11g14050 LOC_Os12g42070 LOC_Os12g06670 LOC_Os11g01740 LOC_Os11g11780 LOC_Os12g42040 LOC_Os12g10740 LOC_Os11g26140 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g39540.1 |
| Rice Genome Annotation | LOC_Os10g39540.1 |
| Ricechip | LOC_Os10g39540.1 |
| KEGG | osa:9268727 dosa:Os10t0541200-01 |
| Entrez-Gene | 9268727 |