RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g39710.1 View Network Show in Genome Browser |
| Other Names | Os10g0543500 |
| Description | strictosidine synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 21224367-21226941 Nucleotide Length: 1110 |
| Protein-coding | LOC_Os10g39710 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g12580 LOC_Os05g48930 LOC_Os04g12560 LOC_Os10g02970 LOC_Os05g47770 LOC_Os03g20949 LOC_Os03g29850 LOC_Os04g12540 LOC_Os04g12600 LOC_Os04g37904 LOC_Os05g33270 More.. |
| Downstream Genes | LOC_Os12g08180 |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-5290 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g39710.1 |
| Rice Genome Annotation | LOC_Os10g39710.1 |
| Ricechip | LOC_Os10g39710.1 |
| KEGG | osa:4349269 dosa:Os10t0543500-01 |
| Entrez-Gene | 4349269 |