RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g39720.1 View Network Show in Genome Browser |
| Other Names | |
| Description | homeobox domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 21227454-21228171 Nucleotide Length: 375 |
| Protein-coding | LOC_Os10g39720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g04870 LOC_Os10g26500 LOC_Os02g14840 LOC_Os01g55200 LOC_Os10g39120 LOC_Os04g49130 LOC_Os03g03130 LOC_Os08g04270 LOC_Os02g17970 LOC_Os06g04850 LOC_Os06g07830 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g39720.1 |
| Rice Genome Annotation | LOC_Os10g39720.1 |
| Ricechip | LOC_Os10g39720.1 |