RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g39810.1 View Network Show in Genome Browser |
| Other Names | Os10g0545200 |
| Description | fatty acid hydroxylase, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 21308453-21311416 Nucleotide Length: 906 |
| Protein-coding | LOC_Os10g39810 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os09g25850 LOC_Os02g53060 LOC_Os08g28730 LOC_Os07g43350 LOC_Os03g18420 LOC_Os03g10510 LOC_Os07g49040 LOC_Os05g46550 LOC_Os02g10690 LOC_Os05g01810 LOC_Os01g03760 More.. |
| Downstream Genes | LOC_Os11g32240 LOC_Os10g40200 LOC_Os12g01370 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00100 rn01100 rn01110 |
| Metacyc Pathways | PWY66-341 PWY66-4 PWY66-3 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g39810.1 |
| Rice Genome Annotation | LOC_Os10g39810.1 |
| Ricechip | LOC_Os10g39810.1 |
| KEGG | osa:4349278 dosa:Os10t0545200-01 |
| Entrez-Gene | 4349278 |