RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g39820.1 View Network Show in Genome Browser |
| Other Names | Os10g0545300 |
| Description | zinc knuckle domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 21311579-21315431 Nucleotide Length: 744 |
| Protein-coding | LOC_Os10g39820 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g42010 LOC_Os01g59990 LOC_Os07g12250 LOC_Os05g40820 LOC_Os07g27930 LOC_Os03g38960 LOC_Os10g29560 LOC_Os09g02700 LOC_Os06g36160 LOC_Os02g13530 LOC_Os02g39700 More.. |
| Downstream Genes | LOC_Os12g05430 LOC_Os11g37080 LOC_Os12g07010 LOC_Os11g06750 LOC_Os11g01420 LOC_Os10g42320 LOC_Os11g41610 LOC_Os12g21798 LOC_Os12g01430 LOC_Os12g42150 LOC_Os10g41470 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g39820.1 |
| Rice Genome Annotation | LOC_Os10g39820.1 |
| Ricechip | LOC_Os10g39820.1 |
| KEGG | osa:4349279 dosa:Os10t0545300-01 |
| Entrez-Gene | 4349279 |