RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g39870.1 View Network Show in Genome Browser |
| Other Names | Os10g0545800 |
| Description | ATG1, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 21331492-21332655 Nucleotide Length: 804 |
| Protein-coding | LOC_Os10g39870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g17520 LOC_Os04g53550 LOC_Os06g46434 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g39870.1 |
| Rice Genome Annotation | LOC_Os10g39870.1 |
| Ricechip | LOC_Os10g39870.1 |
| KEGG | osa:4349284 dosa:Os10t0545800-01 |
| Entrez-Gene | 4349284 |