RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g39930.1 View Network Show in Genome Browser |
| Other Names | Os10g0546600 |
| Description | cytochrome P450 97B2, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 21368384-21373363 Nucleotide Length: 1686 |
| Protein-coding | LOC_Os10g39930 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0019825 | oxygen binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g50110 LOC_Os01g59060 LOC_Os07g49270 LOC_Os03g40600 LOC_Os09g35940 LOC_Os04g52370 LOC_Os08g05620 LOC_Os03g10060 LOC_Os03g04190 LOC_Os05g01970 LOC_Os10g37100 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2875 |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-5175 CAROTENOID-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g39930.1 |
| Rice Genome Annotation | LOC_Os10g39930.1 |
| Ricechip | LOC_Os10g39930.1 |
| KEGG | osa:4349290 dosa:Os10t0546600-01 |
| Entrez-Gene | 4349290 |