RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g40030.4 View Network Show in Genome Browser |
| Other Names | Os10g0548000 |
| Description | short chain dehydrogenase/reductase protein, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 21440267-21443630 Nucleotide Length: 960 |
| Protein-coding | LOC_Os10g40030 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g40730 LOC_Os02g38440 LOC_Os04g52400 LOC_Os01g53680 LOC_Os04g30760 LOC_Os05g44922 LOC_Os02g30060 LOC_Os04g38420 LOC_Os09g04730 LOC_Os09g37280 LOC_Os04g32070 More.. |
| Downstream Genes | LOC_Os12g43740 LOC_Os11g24484 LOC_Os12g27830 LOC_Os12g13930 LOC_Os11g30560 LOC_Os11g07930 LOC_Os11g07922 LOC_Os12g41590 LOC_Os11g16410 LOC_Os12g16010 LOC_Os11g32030 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g40030.4 |
| Rice Genome Annotation | LOC_Os10g40030.4 |
| Ricechip | LOC_Os10g40030.4 |
| KEGG | osa:4349296 dosa:Os10t0548000-02 |
| Entrez-Gene | 4349296 |