RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g40140.1 View Network Show in Genome Browser |
| Other Names | Os10g0549100 |
| Description | MSP domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 21486840-21489738 Nucleotide Length: 702 |
| Protein-coding | LOC_Os10g40140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os10g22450 LOC_Os03g09250 LOC_Os01g68950 LOC_Os01g68940 LOC_Os06g30320 LOC_Os06g09570 LOC_Os07g01920 LOC_Os07g25440 LOC_Os06g02144 LOC_Os03g56820 LOC_Os03g50320 More.. |
| Downstream Genes | LOC_Os11g01420 LOC_Os12g01430 LOC_Os11g29400 LOC_Os10g40590 LOC_Os12g43363 LOC_Os11g20384 LOC_Os12g07950 LOC_Os12g18770 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g40140.1 |
| Rice Genome Annotation | LOC_Os10g40140.1 |
| Ricechip | LOC_Os10g40140.1 |
| KEGG | osa:4349306 dosa:Os10t0549100-01 |
| Entrez-Gene | 4349306 |