RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g40420.1 View Network Show in Genome Browser |
| Other Names | Os10g0551700 |
| Description | LTPL138 - Protease inhibitor/seed storage/LTP family protein precursor, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 21655392-21656252 Nucleotide Length: 489 |
| Protein-coding | LOC_Os10g40420 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0008289 | lipid binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g72290 LOC_Os06g05550 LOC_Os04g31410 LOC_Os06g34790 LOC_Os06g35970 LOC_Os05g38420 LOC_Os05g38410 LOC_Os01g47780 LOC_Os05g30010 LOC_Os08g32160 LOC_Os02g58720 More.. |
| Downstream Genes | LOC_Os11g02350 LOC_Os11g30560 LOC_Os12g03150 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g40420.1 |
| Rice Genome Annotation | LOC_Os10g40420.1 |
| Ricechip | LOC_Os10g40420.1 |
| KEGG | osa:4349323 dosa:Os10t0551700-01 |
| Entrez-Gene | 4349323 |